Amazon sellers, like most small business owners, often dread anything to do with accounting or bookkeeping.

But the best Amazon accounting software tools & services can help:

  • Save you a lot of time by simplifying and automating manual processes
  • Save you a lot of money by ensuring your reporting is accurate

So, in this article, we’ll cover each of the best accounting tools available to you and help you decide which is the best for your Amazon business.

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The best Amazon seller accounting software at a glance

In a hurry? Here’s our pick of the top Amazon FBA accounting tools and the role each is best suited to:

Next up—a deeper dive on each of these tools.

Overall

5.0

Best for

Amazon sellers

Starting from

$17/month

Promotion

Free Trial

LinkMyBooks syncs with Amazon Seller Central (and other platforms like Shopify and eBay) to pull in your gross sales figures along with all expenses.

This is important because most Amazon sellers when starting their eCommerce journey assume they can just account for biweekly disbursements as sales and be done with it.

When I first started, I thought I could just allocate my disbursements as sales but of course the reality is far from that as you are legally required to account for gross sales figures and any expenses.

Whereas Amazon reports expenses in a vast amount of random categories, LinkMyBooks automatically groups these categories to enable clean, efficient, and transparent reporting of your numbers.

The LinkMyBooks accounting software is easy to use, even for those with no accounting background. I’ve been using this tool for years now, and it’s honestly one of the most helpful tools I’ve ever used.

To get started, simply start a free trial, connect your Amazon seller central accounts and the software will pull in your historical data to enable proper bookkeeping to be carried out and accurate cash flow analysis performed.

  • Guided Setup Wizard: Quickly and easily get set up with the perfect settings by choosing your account and tax structure once, and the tool will automatically allocate everything in the future.
  • Tax Support: Sales tax calculations, VAT, and GST are all a breeze with the built-in tax management aspects.

  • Save time & money automating reporting
  • Ensures accounting is accurate
  • Works with all major marketplaces
  • More cost-effective than competitors
  • Generous free trial
  • Your accountant may not be familiar with it

  • Lite (1 sales channel): From $17/month
  • Pro (5 sales channels): From $29/month
  • Premium (10 sales channels): From $56/month

Special offer: Free trial and 50% off for 3 months.

Overall

4.9

Best for

In-house bookkeeping

Starting from

$11/month

Promotion

75% Off

Xero is easy to use and helps sellers stay on top of their finances with real-time updates and status alerts. Additionally, Xero offers a wide range of features such as invoicing, bank reconciliation, and inventory management.

One of the main advantages of using Xero for Amazon accounting is that it integrates with a wide range of eCommerce platforms and online marketplaces, making it easy to keep track of all your sales and expenses in one place.

We have used Xero in our business for over 6 years now. When setting up with our accountant they were insistent that it was the best option. I chose to trust the experts on it, and haven’t regretted it once.

Each month I can pull up a detailed profit and loss report to quickly see where our business is performing well, and where it needs some focused improvement.

  • Automated bank feeds: Sync your bank accounts to Xero and it will pull in every transaction to help save you time and also ensure you don’t miss anything.
  • Detailed reporting: Get granular breakdowns of financial performance with the range of financial reporting tools inside the platform including balance sheets and profit and loss reports.

  • Cloud-based so can be accessed anywhere
  • Automated bank feeds save admin time
  • Multiple users can collaborate on same data in real-time
  • Mobile app to manage finances on the go
  • Learning curve for new users
  • Payroll functionality not as good as dedicated payroll tools

  • Early: $11/month
  • Growing: $32/month
  • Established: $62/month

Overall

4.8

Best for

Automated bookkeeping

Starting from

$59/month

Promotion

Free Trial

Finaloop aims to provide a hands-off, real-time eCommerce bookkeeping service for DTC brands, multi-channel businesses & wholesale sellers. The service is quick and easy to set up with all your apps connected and your account set up within 15 minutes.

The human experts at Finaloop are highly knowledgeable in accounting & eCommerce. This, combined with its fast and accurate automation technology builds you perfect, always-ready books. You’ll be fully armed with all the data you need to make good decisions and grow your sales.

  • Automated bookkeeping: Transactions are reconciled around the clock using AI-driven processes to ensure your books are always ready and your management costs kept lean.
  • Tax returns: Get federal and state tax returns and tax-planning insights that cover everything you need to know and do to stay tax-efficient.

  • Automated bookkeeping saves time & money
  • Integrates with all major eCommerce platforms
  • Used by large, successful brands
  • Real-time COGS valuation
  • Doubts over accuracy of AI-driven transaction categorization

  • Starts at $59/month when billed annually

Overall

4.8

Best for

Outsourced bookkeeping

Starting from

$399/month

Promotion

Free Call

EcomBalance is on a mission to help the eCommerce industry — sellers, software, agencies, and service providers — master their bookkeeping. They take the time to get to know your eCommerce business and become an integral part of your team so you don’t have to worry about your bookkeeping.

It doesn’t matter if you’re selling on Amazon, Shopify, eBay, Etsy, or Walmart, EcomBalance’s bookkeepers specialize in eCommerce bookkeeping and can help you with their unique online accounting solution.

You’ll work with a dedicated team of bookkeepers who provide fast communication and proactive insights into improving your financials and receive monthly analyses so you can know your numbers better and make smarter business decisions.

The management fee also covers all accounting software, so there are no extras to pay on top and all-in-all EcomBalance provides the opportunity to hire a team of proven experts at a lower cost than most accountants would charge for bookkeeping services.

  • Done-for-you: No more entering transactions or reconciling accounts – everything is done for you meaning you get a hands-off, accurate monthly finance report and can focus more time on building your business.
  • Experienced operators: EcomBalance is owned and operated by seasoned entrepreneurs who are experts in building efficient processes which translates into a cost-effective solution for you.

  • Hands off bookkeeping experience
  • Operated by proven successful entrepreneurs
  • Regular reporting gives financial confidence
  • Cost-effective in comparison to accountant
  • More expensive than doing it yourself
  • Costs increase with marketplaces

  • From $399/month. Custom quote tool available.

Overall

4.8

Best for

UK sellers

Starting from

£78/month

Promotion

Save £100

Osome is a software for Amazon sellers that processes all transactions from within your Amazon account, along with other income and business expenses.

The Osome platform is designed to be an all-in-one Amazon FBA accounting software, and as such, online retailers won’t need any other software subscriptions to maintain the accounts for their Amazon FBA business. It uses AI-driven systems to automate your bookkeeping and dramatically reduce your accounting costs

  • AI-driven accounting software: Osome is continually improving its transaction categorizing systems to help automate bookkeeping and keep costs down in comparison to 100% human accounting.
  • Daily accountant answers: With dedicated regular accountant answers, Osome claims to be cheaper than an in-house accountant but better service than an outsourced CPA.
  • Easy document uploads: Amazon sellers can easily add documents such as invoices and receipts to the accounting software platform to ensure end-of-year filing is a breeze.

  • AI-driven systems reduce costs of bookkeeping
  • Quick contact with accountant if needed
  • Clean and modern user interface
  • No need for extra software
  • Only available for UK and Singapore sellers

  • Operate: £78/month
  • Grow: £149/month
  • Scale: From £249/month

Exclusive offer: Save up to £100

Overall

4.7

Best for

A Xero alternative

Starting from

$30/month

Promotion

Save 30%

QuickBooks Online is another cloud-based accounting software that can help Amazon sellers stay on top of their finances with real-time updates and status alerts.

It has many capabilities, including invoicing, bank reconciliation, double-entry accounting, and settings that help Amazon sellers track inventory for accurate reporting. Both Xero and QuickBooks Online offer free trials, so Amazon sellers can try out the software before committing to a paid plan.

There isn’t a great deal of difference between the two most popular options, with each being in the running for the best accounting software for small businesses. QuickBooks Online is a great alternative to QuickBooks Desktop which requires eCommerce sellers to download a full software suite to manage their business finances.

  • Expense tracking: Easily upload receipts and invoices to track expenses diligently and create an audit-friendly paper trail.
  • Profit & loss: Get detailed reports that break down each line of income and expenditure so you can see where you need to focus most to become a highly profitable Amazon business.

  • Cloud-based software that can be accessed anywhere
  • Automated bank feeds save admin time
  • Mobile app for on-the-go receipt uploads
  • Lack of eCommerce industry-specific features
  • File-size issues and limitations on number of transactions

  • Simple Start: $30/month
  • Essentials: $60/month
  • Plus: $90/month
  • Advanced: $200/month

Overall

4.5

Best for

Large Amazon sellers

Starting from

$349/month

Promotion

Free Trial

A2X is a powerful accounting software designed to help small business owners automate the time-consuming tasks of importing sales reports and categorizing expenses.

The accounting software for Amazon is just the start of its features, too. A2X integrates with Shopify, Walmart, Etsy, eBay, and more to ensure multi-channel sellers have all their reporting needs taken care of. It also offers inventory management functionality with features such as inventory valuation reporting, and cost of goods recording.

A2X is a well-respected name in the Amazon accounting software space and was actually the first accounting software I used when I started to sell on Amazon. However, when the above-mentioned LinkMyBooks launched, we moved over due to the large cost savings available.

  • Well-established: A2X is the original player in this space and has a long history of serving eCommerce businesses.
  • Multi-channel: Works with multiple sales channels including Amazon, Shopify, eBay, Walmart, and more.

  • The original solution for syncing with Amazon
  • Growing number of marketplace integrations
  • Gives option to use cash and accrual-based accounting
  • High pricing plans compared to LinkMyBooks

  • Single channel: $49/month for 1,000 orders
  • Multi-channel: $79/month for 1,000 orders

Overall

4.5

Best for

European expansion

Starting from

€39/month

Promotion

Annual Deal

Hello Tax helps Amazon sellers get set up in Europe with a range of VAT compliance services. These services include VAT registration and filing along with the more recently introduced One Stop Shop.

VAT compliance can be a major headache in one country, let alone when expanding into multiple European countries each with their own rules and criteria. Hello Tax’s solution helps put sellers mind at ease about compliance while freeing their time up to focus on growing the business.

  • VAT Registration & Filing: Get a VAT number wherever and whenever it’s necessary with Hello Tax’s digital VAT Registration Process, then let their local accountants manage your VAT Filings & Returns.
  • One-Stop Shop: Take care of all your EU VAT duties in just one country. Simplify your VAT compliance across Europe with OSS.
  • VAT Automation Software: Have all information and deadlines clearly displayed in one place for one or many countries and companies.

  • Handle all compliance in one place
  • Hands-off solution that frees up time and mental energy
  • Software gives clear reports to make information readily available at any time
  • Integrates with all major eCommerce platforms
  • Can get expensive when selling across Europe

  • New Seller: €39/month for up to 500 annual orders
  • Established Seller: €99/month for unlimited transactions in 1 country
  • 5 Countries Pack: €399/month for unlimited transactions in 5 countries

Amazon FBA profit dashboards

As an Amazon seller, you’ll no doubt be keeping a close eye on your sales. Refreshing your Amazon seller account app every five minutes when you first start selling is a totally natural obsession – don’t worry!

But while your self-discipline for frequency of sales checking will improve over time, you’ll want to keep a closer eye on your numbers than waiting a full month until your next profit and loss statement is ready.

That’s where dedicated Amazon reporting software tools come in.

These tools pull sales data from your Amazon Seller Central account to give you real-time updates on key numbers.

Whilst they aren’t a replacement for quality accounting software options, these premium Amazon seller apps will certainly help you keep your finger on the pulse of your business.

Here are the best options available for you:

9. Sellerboard

Sellerboard is a powerful analytics dashboard that connects to your Amazon account in order to give up-to-date snapshots of profitability.

Its profit and loss reporting tool gives actionable insight to help you know what is working well, and what needs attention.

It also has a suite of other tools for functions like PPC and inventory tracking whilst giving multi-currency support and allowing multiple users to access the tool.

Amazon FBA sellers without prior accounting knowledge can take advantage of this easy-to-use tool to manage cash flow and improve sales.

Cost: $19/mo – $79/mo (Extended 2 month free trial here)


10. Profits by Helium 10

Is it any surprise Helium 10 also have a tool for financial reporting?

This enterprise-level suite of tools really does have it all. Profits is a detailed analytics software for Amazon sellers that breaks down sales metrics by marketplace and by SKU.

It also features an inventory management tool that helps Amazon sellers stay in stock at all times.

Given the range of tools available in this competitively priced suite, small businesses around the world are putting them to great use to grow sales on Amazon.

Cost: From $39/month (Save 10% for life discount with code BBU10)


11. Shopkeeper

Shopkeeper is a profit dashboard for Amazon sellers, offering support for multiple marketplaces.

It does the boring part of aggregating income and expenses for you, so you can focus on the fun part – making important decisions based on this data, to grow your Amazon business

Cost: From $20/month


Amazon accounting software FAQs

We compiled this list using:

  • Personal experience: All of our best tool roundups and reviews are written by humans who’ve spent much of their eCommerce journey using and testing various software tools. We spend hours every week using and testing tools for our own businesses and this helps us form opinions on what works well.
  • Community feedback: We also source opinions from our large community of Amazon sellers and eCommerce operators to make sure there is a full range of opinions.
  • Expert insight: We regularly interview industry experts on our podcast and for our articles, and often asked what tools they are using and recommend.

Some links within our content may be affiliate links, whereby if you make a purchase after clicking we might earn a small commission at no extra cost to you. This does not affect our reviews as we only ever recommend products we know and approve of.

Amazon accounting software refers to third-party accounting solutions that are designed to help Amazon sellers manage their finances and accounting needs more efficiently. Solutions range from free accounting software that gives basic reporting to high-end Amazon accounting software that gives a high-level of reporting data. These software solutions typically integrate with Amazon’s Seller Central, enabling sellers to track sales, expenses, inventory, and other financial data seamlessly.

The short answer is yes, it’s highly advisable. However, it does depend on the complexity of your business and the time and skills you have to manage things yourself. At minimum, we would recommend a good quality Amazon-knowledgable accountant to submit your annual returns, but in time you may also want to consider outsourcing the bookkeeping side of things too. Good advice throughout your eCommerce journey can often help save more money than it costs.

Amazon sellers can benefit significantly from using online bookkeeping software for several reasons:

  • Time-saving: Managing financial records manually can be time-consuming and prone to errors. Online bookkeeping software automates many accounting tasks, such as transaction categorization, expense tracking, and invoicing, saving Amazon sellers valuable time.
  • Accurate financial data: Amazon FBA accounting software automatically syncs with Amazon Seller Central, ensuring that sellers have accurate, up-to-date financial information. This reduces the risk of errors and helps sellers make informed business decisions.
  • Tax compliance: Online bookkeeping software typically includes features that simplify tax preparation, such as generating financial statements, tracking deductible expenses, and calculating sales tax liabilities. This can help Amazon sellers remain compliant with tax regulations and avoid potential penalties.
  • Improved cash flow management: Online bookkeeping software helps sellers monitor their cash flow by providing real-time financial data and reports. This enables them to make better-informed decisions regarding inventory management, pricing, and other key aspects of their business.
  • Scalability: As an Amazon seller’s business grows, managing finances manually becomes increasingly challenging. Online bookkeeping software can scale with the business, accommodating more transactions, customers, and products without requiring additional resources.
  • Access to financial insights: Online bookkeeping software offers various reporting tools that provide valuable insights into a seller’s business performance. These insights can help sellers identify trends, uncover areas for improvement, and make data-driven decisions to grow their business.
  • Collaboration: Cloud-based bookkeeping software allows multiple users to access and work on financial data simultaneously. This facilitates collaboration between business partners or team members and ensures that everyone is on the same page regarding the company’s financial situation.

Overall, using online bookkeeping software can help an Amazon business streamline its financial management, maintain accurate records, stay compliant with tax regulations, and make better-informed decisions to grow its business.

Yes, however, the data will not be presented in a manageable way right out of the box. This is why it is highly recommended to use a solution like LinkMyBooks which can categorize all transactions seamlessly and make the bookkeeping process far, far easier.

Amazon accounting software accesses Seller Central data using Amazon’s Marketplace Web Service (MWS) API. The API (Application Programming Interface) is a set of rules and protocols that allows different software applications to communicate with each other. In this case, the API enables the accounting software to securely access and exchange information with Amazon Seller Central.

To set up the integration between the accounting software and Seller Central, sellers need to follow the instructions within the specific accounting tool and grant permissions from within their Amazon account.

Yes, absolutely. We do this with our accountant. Set them up as a user in your Seller Central account and give them the appropriate user permissions so they can access your business reports.

Choosing the best accounting software for your Amazon business

It’s clear there are a number of accounting software for Amazon sellers each with its own strengths and weaknesses.

The key to deciding which one is right for you involves a few things:

  1. Admin: How much are you willing to do on your end? If you’re happy to get your hands dirty with some finance admin, an automation tool like LinkMyBooks coupled with Quickbooks or Xero is perfect.
  2. Accountant. If you already have an accountant it’s best to discuss this with them as they will have a certain way of doing things. Finding the right accounting software for Amazon sales should be heavily influenced by their preferences.
  3. Budget. For most Amazon sellers, finance and bookkeeping is the last thing you want to be doing. So, if you have the budget, having finances completely managed by a CPA would be the dream solution.

Only you can decide what is right for you, but in this article, we hope to have provided you with some sound insight on what the best accounting software solutions might be for your business.

May the cash flow be ever in your favor!

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Ben Donovan

WRITTEN BY

Ben Donovan
Ben is the founder of Brand Builder University and has a passion for helping normal everyday people create financial freedom by building successful eCommerce businesses. He lives in Manchester, UK with his wife and 2 children and loves to play sport and watch continual re-runs of The Office (US version, obviously).
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